Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox17Q61473 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.22□□□□□ -0.45
Sox17Q61473 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox17Q61473 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Sox17Q61473 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.22□□□□□ -0.45
Sox17Q61473 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox17Q61473 Gm27525-201ENSMUST00000184465 107 ntBASIC12.22□□□□□ -0.45
Sox17Q61473 Gm43703-201ENSMUST00000200523 763 ntBASIC12.22□□□□□ -0.45
Sox17Q61473 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox17Q61473 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 Gm17330-201ENSMUST00000221047 165 ntBASIC12.22□□□□□ -0.45
Sox17Q61473 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox17Q61473 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox17Q61473 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.21□□□□□ -0.45
Sox17Q61473 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sox17Q61473 Gm12585-201ENSMUST00000117307 290 ntBASIC12.21□□□□□ -0.45
Sox17Q61473 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox17Q61473 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
Sox17Q61473 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox17Q61473 Gm38294-201ENSMUST00000192831 381 ntBASIC12.21□□□□□ -0.45
Sox17Q61473 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.21□□□□□ -0.45
Sox17Q61473 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sox17Q61473 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox17Q61473 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox17Q61473 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox17Q61473 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.46
Sox17Q61473 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox17Q61473 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox17Q61473 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox17Q61473 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox17Q61473 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox17Q61473 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox17Q61473 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox17Q61473 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm29608-201ENSMUST00000190444 463 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms