Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mir7684-201ENSMUST00000183858 60 ntBASIC14.44□□□□□ -0.1
Ift88Q61371 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.44□□□□□ -0.1
Ift88Q61371 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.44□□□□□ -0.1
Ift88Q61371 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.44□□□□□ -0.1
Ift88Q61371 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Gm12151-201ENSMUST00000121374 290 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Gm24694-201ENSMUST00000180054 110 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Mir6956-201ENSMUST00000183598 62 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Mir8102-201ENSMUST00000184148 139 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Gm27663-201ENSMUST00000184839 110 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.43□□□□□ -0.1
Ift88Q61371 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.43□□□□□ -0.1
Ift88Q61371 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.43□□□□□ -0.1
Ift88Q61371 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.43□□□□□ -0.1
Ift88Q61371 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Ift88Q61371 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ift88Q61371 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ift88Q61371 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.42□□□□□ -0.1
Ift88Q61371 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.42□□□□□ -0.1
Ift88Q61371 Gm14719-201ENSMUST00000121891 340 ntBASIC14.42□□□□□ -0.1
Ift88Q61371 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.42□□□□□ -0.1
Ift88Q61371 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm38223-201ENSMUST00000194484 695 ntBASIC14.42□□□□□ -0.1
Ift88Q61371 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.42□□□□□ -0.1
Ift88Q61371 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.42□□□□□ -0.1
Ift88Q61371 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.42□□□□□ -0.1
Ift88Q61371 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.42□□□□□ -0.1
Ift88Q61371 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ift88Q61371 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ift88Q61371 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.41□□□□□ -0.1
Ift88Q61371 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.41□□□□□ -0.1
Ift88Q61371 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms