Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm15703-201ENSMUST00000120250 880 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm23119-201ENSMUST00000158610 140 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col11a1Q61245 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.29□□□□□ -0.12
Col11a1Q61245 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col11a1Q61245 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col11a1Q61245 Mir1956-201ENSMUST00000157748 65 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm3332-201ENSMUST00000189337 928 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm18893-201ENSMUST00000198416 943 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Gm2517-201ENSMUST00000215651 348 ntBASIC14.29□□□□□ -0.12
Col11a1Q61245 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm24934-201ENSMUST00000103764 111 ntBASIC14.28□□□□□ -0.12
Col11a1Q61245 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm16166-201ENSMUST00000118291 787 ntBASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm15595-201ENSMUST00000120840 961 ntBASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm17831-201ENSMUST00000205579 900 ntBASIC14.28□□□□□ -0.12
Col11a1Q61245 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.28□□□□□ -0.12
Col11a1Q61245 Sybu-209ENSMUST00000228639 4113 ntBASIC14.28□□□□□ -0.12
Col11a1Q61245 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col11a1Q61245 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col11a1Q61245 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm23596-201ENSMUST00000104304 132 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Mir874-201ENSMUST00000104769 76 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Mir7076-201ENSMUST00000183519 74 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.27□□□□□ -0.12
Col11a1Q61245 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col11a1Q61245 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm10288-201ENSMUST00000084614 537 ntBASIC14.27□□□□□ -0.12
Col11a1Q61245 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col11a1Q61245 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col11a1Q61245 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col11a1Q61245 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col11a1Q61245 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.27□□□□□ -0.13
Col11a1Q61245 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col11a1Q61245 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms