Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm45668-201ENSMUST00000211271 493 ntBASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav5d-4Q5R1F6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav5d-4Q5R1F6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav5d-4Q5R1F6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms