Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Gm14726-201ENSMUST00000120623 896 ntBASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim41Q5NCC3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Gm5639-201ENSMUST00000122305 2403 ntBASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trim41Q5NCC3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm9061-201ENSMUST00000182707 1006 ntBASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm18393-201ENSMUST00000208349 1131 ntBASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm18515-201ENSMUST00000219755 797 ntBASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gm8894-201ENSMUST00000074642 666 ntBASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim41Q5NCC3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Gm38317-201ENSMUST00000195564 343 ntBASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 AC126253.1-202ENSMUST00000226732 835 ntBASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim41Q5NCC3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Gm8228-201ENSMUST00000189949 2192 ntBASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Gm14704-201ENSMUST00000120300 874 ntBASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC22.55■■□□□ 1.2
Trim41Q5NCC3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Trim41Q5NCC3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim41Q5NCC3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim41Q5NCC3 Gm37019-201ENSMUST00000192133 2134 ntBASIC22.54■■□□□ 1.2
Trim41Q5NCC3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms