Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm12091-201ENSMUST00000146791 830 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm8515-201ENSMUST00000194852 576 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm18018-201ENSMUST00000198273 408 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gm18624-201ENSMUST00000220966 658 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.91□□□□□ -0.34
Scn2bQ56A07 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn2bQ56A07 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.9□□□□□ -0.34
Scn2bQ56A07 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.9□□□□□ -0.34
Scn2bQ56A07 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm14928-201ENSMUST00000120198 477 ntBASIC12.9□□□□□ -0.34
Scn2bQ56A07 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.9□□□□□ -0.34
Scn2bQ56A07 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn2bQ56A07 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Scn2bQ56A07 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn2bQ56A07 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn2bQ56A07 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn2bQ56A07 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn2bQ56A07 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms