Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm12502-201ENSMUST00000120197 444 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm13342-201ENSMUST00000121055 207 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm13316-201ENSMUST00000140537 691 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm43758-201ENSMUST00000199500 367 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm9368-201ENSMUST00000219348 831 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm24526-201ENSMUST00000082921 158 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm24548-201ENSMUST00000158650 108 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm38266-201ENSMUST00000194931 421 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.06■□□□□ 0
Rc3h1Q4VGL6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rc3h1Q4VGL6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Rc3h1Q4VGL6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm13297-201ENSMUST00000120205 934 ntBASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm6621-201ENSMUST00000193251 772 ntBASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm5781-201ENSMUST00000219792 443 ntBASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms