Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Bbof1Q3V079 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Bbof1Q3V079 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Bbof1Q3V079 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Bbof1Q3V079 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.33□□□□□ -0.11
Bbof1Q3V079 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.33□□□□□ -0.12
Bbof1Q3V079 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm5356-201ENSMUST00000093326 615 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Rubie-203ENSMUST00000227803 2430 ntBASIC14.33□□□□□ -0.12
Bbof1Q3V079 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Bbof1Q3V079 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.32□□□□□ -0.12
Bbof1Q3V079 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.32□□□□□ -0.12
Bbof1Q3V079 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Gm12928-201ENSMUST00000117115 573 ntBASIC14.32□□□□□ -0.12
Bbof1Q3V079 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Bbof1Q3V079 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm12403-201ENSMUST00000121384 959 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm17794-201ENSMUST00000220252 955 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.31□□□□□ -0.12
Bbof1Q3V079 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.31□□□□□ -0.12
Bbof1Q3V079 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbof1Q3V079 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
Bbof1Q3V079 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbof1Q3V079 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbof1Q3V079 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbof1Q3V079 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms