Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Proscos-202ENSMUST00000178990 666 ntBASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Mir686-201ENSMUST00000102174 109 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm12138-201ENSMUST00000122180 951 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm27892-201ENSMUST00000185017 106 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm28693-202ENSMUST00000190758 331 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkl5Q3UTQ8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkl5Q3UTQ8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms