Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf44Q3UHJ8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Rnf44Q3UHJ8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf44Q3UHJ8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf44Q3UHJ8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms