Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.28□□□□□ -0.44
Mmp25Q3U435 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.28□□□□□ -0.44
Mmp25Q3U435 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Mmp25Q3U435 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp25Q3U435 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.27□□□□□ -0.45
Mmp25Q3U435 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Gm4768-201ENSMUST00000206199 686 ntBASIC12.27□□□□□ -0.45
Mmp25Q3U435 Gm19163-201ENSMUST00000223313 780 ntBASIC12.27□□□□□ -0.45
Mmp25Q3U435 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.27□□□□□ -0.45
Mmp25Q3U435 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp25Q3U435 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Gm17208-201ENSMUST00000168388 535 ntBASIC12.26□□□□□ -0.45
Mmp25Q3U435 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Mir7085-201ENSMUST00000184353 66 ntBASIC12.26□□□□□ -0.45
Mmp25Q3U435 AY702102-202ENSMUST00000194651 1173 ntBASIC12.26□□□□□ -0.45
Mmp25Q3U435 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.26□□□□□ -0.45
Mmp25Q3U435 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Mmp25Q3U435 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms