Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gm27501-201ENSMUST00000183599 107 ntBASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gm6013-201ENSMUST00000212264 699 ntBASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rufy4Q3TYX8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm14704-201ENSMUST00000120300 874 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm4768-201ENSMUST00000206199 686 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rufy4Q3TYX8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Gm22121-201ENSMUST00000175148 54 ntBASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.34□□□□□ -0.11
Rufy4Q3TYX8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms