Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Gm38144-201ENSMUST00000192790 465 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.85□□□□□ -0.19
Trim43aQ3TL54 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43aQ3TL54 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Gm7730-201ENSMUST00000212486 454 ntBASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43aQ3TL54 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43aQ3TL54 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43aQ3TL54 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43aQ3TL54 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm24694-201ENSMUST00000180054 110 ntBASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm27663-201ENSMUST00000184839 110 ntBASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43aQ3TL54 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms