Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm14350-201ENSMUST00000116642 640 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm44397-201ENSMUST00000195950 113 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm6983-201ENSMUST00000214912 628 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm5867-201ENSMUST00000063197 592 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cul4aQ3TCH7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Gm12341-201ENSMUST00000119724 503 ntBASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Gm19220-201ENSMUST00000222682 803 ntBASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms