Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Treml4Q3LRV9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.29□□□□□ -0.44
Treml4Q3LRV9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.29□□□□□ -0.44
Treml4Q3LRV9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.28□□□□□ -0.44
Treml4Q3LRV9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.28□□□□□ -0.44
Treml4Q3LRV9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Treml4Q3LRV9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Treml4Q3LRV9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Treml4Q3LRV9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Treml4Q3LRV9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms