Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Q3KNL4 Gm14719-201ENSMUST00000121891 340 ntBASIC12.83□□□□□ -0.36
Q3KNL4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Q3KNL4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Q3KNL4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.83□□□□□ -0.36
Q3KNL4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.83□□□□□ -0.36
Q3KNL4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.83□□□□□ -0.36
Q3KNL4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.83□□□□□ -0.36
Q3KNL4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Q3KNL4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.82□□□□□ -0.36
Q3KNL4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Q3KNL4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Q3KNL4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Q3KNL4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.82□□□□□ -0.36
Q3KNL4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Q3KNL4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.82□□□□□ -0.36
Q3KNL4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Q3KNL4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3KNL4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Q3KNL4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.81□□□□□ -0.36
Q3KNL4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.81□□□□□ -0.36
Q3KNL4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.81□□□□□ -0.36
Q3KNL4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Syt7-204ENSMUST00000223586 1344 ntBASIC12.81□□□□□ -0.36
Q3KNL4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Q3KNL4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3KNL4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3KNL4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms