Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Mir7088-201ENSMUST00000184227 86 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm27149-201ENSMUST00000184716 1266 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm8268-201ENSMUST00000209683 458 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm26134-201ENSMUST00000178484 110 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm9884-201ENSMUST00000194343 1222 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm18198-201ENSMUST00000204986 1551 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm23612-201ENSMUST00000103823 110 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm8152-201ENSMUST00000120842 637 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm14524-201ENSMUST00000121066 683 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm25554-201ENSMUST00000158075 113 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm18367-201ENSMUST00000176139 600 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm23576-201ENSMUST00000179918 110 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm44216-201ENSMUST00000203942 157 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm7405-201ENSMUST00000121476 1337 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm15982-201ENSMUST00000121681 554 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm44401-201ENSMUST00000204462 2375 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm24809-201ENSMUST00000175318 271 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm43866-201ENSMUST00000203894 839 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm8615-201ENSMUST00000025307 771 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Krtap6-3-201ENSMUST00000079151 444 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms