Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Gm37666-201ENSMUST00000194110 866 ntBASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Chrna5Q2MKA5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Gm14832-201ENSMUST00000121289 322 ntBASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Gm5070-201ENSMUST00000177599 862 ntBASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Gm7467-201ENSMUST00000185173 652 ntBASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Rprl1-202ENSMUST00000198476 238 ntBASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna5Q2MKA5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12616-201ENSMUST00000118594 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm14999-201ENSMUST00000121039 624 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12624-201ENSMUST00000177615 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12621-201ENSMUST00000177760 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12615-201ENSMUST00000177970 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12622-201ENSMUST00000177975 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12627-201ENSMUST00000178412 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12625-201ENSMUST00000179122 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12614-201ENSMUST00000179586 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm12613-201ENSMUST00000180323 382 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm45770-201ENSMUST00000212105 616 ntBASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna5Q2MKA5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms