Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm14726-201ENSMUST00000120623 896 ntBASIC12.5□□□□□ -0.41
Hoxc4Q08624 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm16296-201ENSMUST00000159905 325 ntBASIC12.5□□□□□ -0.41
Hoxc4Q08624 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc4Q08624 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.49□□□□□ -0.41
Hoxc4Q08624 Gm12058-201ENSMUST00000118614 437 ntBASIC12.49□□□□□ -0.41
Hoxc4Q08624 Gm14381-201ENSMUST00000122105 414 ntBASIC12.49□□□□□ -0.41
Hoxc4Q08624 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.49□□□□□ -0.41
Hoxc4Q08624 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.49□□□□□ -0.41
Hoxc4Q08624 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc4Q08624 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.48□□□□□ -0.41
Hoxc4Q08624 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc4Q08624 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms