Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm27839-201ENSMUST00000184242 106 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.46□□□□□ -0.57
Thbs3Q05895 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Thbs3Q05895 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Thbs3Q05895 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Thbs3Q05895 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.46□□□□□ -0.58
Thbs3Q05895 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.46□□□□□ -0.58
Thbs3Q05895 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm27847-201ENSMUST00000183711 107 ntBASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm27375-201ENSMUST00000183799 107 ntBASIC11.45□□□□□ -0.58
Thbs3Q05895 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.45□□□□□ -0.58
Thbs3Q05895 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms