Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Scn1bP97952 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Scn1bP97952 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.91□□□□□ -0.5
Scn1bP97952 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.91□□□□□ -0.5
Scn1bP97952 Gm13365-201ENSMUST00000121188 973 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.91□□□□□ -0.5
Scn1bP97952 Gm25911-201ENSMUST00000157621 56 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.91□□□□□ -0.5
Scn1bP97952 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.91□□□□□ -0.5
Scn1bP97952 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.91□□□□□ -0.5
Scn1bP97952 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Scn1bP97952 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Scn1bP97952 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Scn1bP97952 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.91□□□□□ -0.5
Scn1bP97952 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Scn1bP97952 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm4995-201ENSMUST00000117247 432 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm18889-201ENSMUST00000174284 929 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Scn1bP97952 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Scn1bP97952 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.9□□□□□ -0.5
Scn1bP97952 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Scn1bP97952 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Scn1bP97952 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn1bP97952 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn1bP97952 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn1bP97952 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn1bP97952 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn1bP97952 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn1bP97952 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn1bP97952 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn1bP97952 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn1bP97952 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms