Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm43433-201ENSMUST00000196573 481 ntBASIC13.3□□□□□ -0.28
Thumpd3P97770 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.3□□□□□ -0.28
Thumpd3P97770 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Thumpd3P97770 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thumpd3P97770 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.29□□□□□ -0.28
Thumpd3P97770 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.29□□□□□ -0.28
Thumpd3P97770 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thumpd3P97770 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.29□□□□□ -0.28
Thumpd3P97770 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.28□□□□□ -0.28
Thumpd3P97770 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Gm5425-201ENSMUST00000214125 459 ntBASIC13.28□□□□□ -0.28
Thumpd3P97770 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.28□□□□□ -0.28
Thumpd3P97770 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thumpd3P97770 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.27□□□□□ -0.28
Thumpd3P97770 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.27□□□□□ -0.28
Thumpd3P97770 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thumpd3P97770 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms