Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.95□□□□□ -0.66
Npas1P97459 Gm25911-201ENSMUST00000157621 56 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Npas1P97459 Gm9719-201ENSMUST00000162765 543 ntBASIC10.95□□□□□ -0.66
Npas1P97459 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gm44719-201ENSMUST00000206404 149 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.95□□□□□ -0.66
Npas1P97459 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.94□□□□□ -0.66
Npas1P97459 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.94□□□□□ -0.66
Npas1P97459 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Npas1P97459 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.94□□□□□ -0.66
Npas1P97459 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Mir698-201ENSMUST00000102164 109 ntBASIC10.94□□□□□ -0.66
Npas1P97459 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Npas1P97459 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Npas1P97459 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Npas1P97459 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Npas1P97459 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.93□□□□□ -0.66
Npas1P97459 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.93□□□□□ -0.66
Npas1P97459 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Npas1P97459 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Npas1P97459 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms