Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim43bP86448 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim43bP86448 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43bP86448 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim43bP86448 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim43bP86448 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Gm13385-201ENSMUST00000121089 220 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 Gm23984-201ENSMUST00000157139 203 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.44□□□□□ -0.26
Trim43bP86448 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43bP86448 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim43bP86448 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim43bP86448 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Trim43bP86448 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43bP86448 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43bP86448 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim43bP86448 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.43□□□□□ -0.26
Trim43bP86448 Gm45384-201ENSMUST00000210451 277 ntBASIC13.43□□□□□ -0.26
Trim43bP86448 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim43bP86448 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43bP86448 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43bP86448 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Gm11918-201ENSMUST00000121660 179 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43bP86448 Gm9002-201ENSMUST00000178437 499 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Gm8927-201ENSMUST00000181978 981 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Mir7221-201ENSMUST00000184009 72 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Gm27701-201ENSMUST00000184498 110 ntBASIC13.42□□□□□ -0.26
Trim43bP86448 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43bP86448 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim43bP86448 Gm3222-201ENSMUST00000071282 990 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms