Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
SgcaP82350 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm15770-201ENSMUST00000117498 584 ntBASIC10.94□□□□□ -0.66
SgcaP82350 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.94□□□□□ -0.66
SgcaP82350 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcaP82350 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcaP82350 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcaP82350 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.94□□□□□ -0.66
SgcaP82350 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.94□□□□□ -0.66
SgcaP82350 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SgcaP82350 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.94□□□□□ -0.66
SgcaP82350 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
SgcaP82350 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SgcaP82350 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcaP82350 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SgcaP82350 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SgcaP82350 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SgcaP82350 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
SgcaP82350 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Mir3113-201ENSMUST00000175478 76 ntBASIC10.93□□□□□ -0.66
SgcaP82350 Gm33320-201ENSMUST00000192232 530 ntBASIC10.93□□□□□ -0.66
SgcaP82350 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SgcaP82350 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms