Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm12341-201ENSMUST00000119724 503 ntBASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm44397-201ENSMUST00000195950 113 ntBASIC14.38□□□□□ -0.11
Hmgb1P63158 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm6983-201ENSMUST00000214912 628 ntBASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm6218-201ENSMUST00000219812 628 ntBASIC14.38□□□□□ -0.11
Hmgb1P63158 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.38□□□□□ -0.11
Hmgb1P63158 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb1P63158 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb1P63158 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.37□□□□□ -0.11
Hmgb1P63158 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.37□□□□□ -0.11
Hmgb1P63158 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.37□□□□□ -0.11
Hmgb1P63158 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb1P63158 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hmgb1P63158 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb1P63158 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb1P63158 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms