Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm38002-201ENSMUST00000193255 180 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx1P63006 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx1P63006 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Lhx1P63006 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Acot6-202ENSMUST00000222921 3622 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.8□□□□□ -0.36
Lhx1P63006 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Gm11591-201ENSMUST00000120063 702 ntBASIC12.8□□□□□ -0.36
Lhx1P63006 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.8□□□□□ -0.36
Lhx1P63006 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lhx1P63006 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.8□□□□□ -0.36
Lhx1P63006 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.8□□□□□ -0.36
Lhx1P63006 Gm18584-201ENSMUST00000203098 964 ntBASIC12.8□□□□□ -0.36
Lhx1P63006 Gm18054-201ENSMUST00000207539 555 ntBASIC12.8□□□□□ -0.36
Lhx1P63006 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lhx1P63006 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Lhx1P63006 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.79□□□□□ -0.36
Lhx1P63006 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lhx1P63006 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Gm22018-201ENSMUST00000104357 131 ntBASIC12.79□□□□□ -0.36
Lhx1P63006 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.79□□□□□ -0.36
Lhx1P63006 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.79□□□□□ -0.36
Lhx1P63006 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.79□□□□□ -0.36
Lhx1P63006 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.79□□□□□ -0.36
Lhx1P63006 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lhx1P63006 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms