Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smg6P61406 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.92■□□□□ 0.46
Smg6P61406 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.92■□□□□ 0.46
Smg6P61406 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.92■□□□□ 0.46
Smg6P61406 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.92■□□□□ 0.46
Smg6P61406 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smg6P61406 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Smg6P61406 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Smg6P61406 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smg6P61406 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smg6P61406 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Smg6P61406 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Gm12384-201ENSMUST00000119228 919 ntBASIC17.91■□□□□ 0.46
Smg6P61406 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.91■□□□□ 0.46
Smg6P61406 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smg6P61406 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.91■□□□□ 0.46
Smg6P61406 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.91■□□□□ 0.46
Smg6P61406 Gm17435-202ENSMUST00000212699 1998 ntBASIC17.91■□□□□ 0.46
Smg6P61406 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smg6P61406 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.91■□□□□ 0.46
Smg6P61406 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Gm16202-201ENSMUST00000117532 544 ntBASIC17.9■□□□□ 0.46
Smg6P61406 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Smg6P61406 Gm26927-201ENSMUST00000182385 965 ntBASIC17.9■□□□□ 0.46
Smg6P61406 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smg6P61406 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.9■□□□□ 0.46
Smg6P61406 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smg6P61406 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.89■□□□□ 0.46
Smg6P61406 Gm14723-201ENSMUST00000118686 215 ntBASIC17.89■□□□□ 0.46
Smg6P61406 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Smg6P61406 Gm40466-201ENSMUST00000212174 422 ntBASIC17.89■□□□□ 0.46
Smg6P61406 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.89■□□□□ 0.46
Smg6P61406 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smg6P61406 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Smg6P61406 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smg6P61406 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smg6P61406 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smg6P61406 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms