Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Tubgcp3P58854 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.34□□□□□ -0.27
Tubgcp3P58854 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubgcp3P58854 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubgcp3P58854 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Tubgcp3P58854 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubgcp3P58854 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubgcp3P58854 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubgcp3P58854 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Tubgcp3P58854 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gm2495-201ENSMUST00000191160 466 ntBASIC13.33□□□□□ -0.28
Tubgcp3P58854 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gm18018-201ENSMUST00000198273 408 ntBASIC13.33□□□□□ -0.28
Tubgcp3P58854 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.33□□□□□ -0.28
Tubgcp3P58854 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.33□□□□□ -0.28
Tubgcp3P58854 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubgcp3P58854 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.32□□□□□ -0.28
Tubgcp3P58854 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.32□□□□□ -0.28
Tubgcp3P58854 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.32□□□□□ -0.28
Tubgcp3P58854 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.32□□□□□ -0.28
Tubgcp3P58854 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.32□□□□□ -0.28
Tubgcp3P58854 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubgcp3P58854 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubgcp3P58854 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms