Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Gm27618-201ENSMUST00000183671 60 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sssca1P56873 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.55□□□□□ -0.72
Sssca1P56873 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sssca1P56873 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Sssca1P56873 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.54□□□□□ -0.72
Sssca1P56873 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 Gm17837-201ENSMUST00000186435 985 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Gm38144-201ENSMUST00000192790 465 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.54□□□□□ -0.72
Sssca1P56873 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Sssca1P56873 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Gm5161-201ENSMUST00000075243 853 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Gm24447-201ENSMUST00000083977 338 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Matn2-203ENSMUST00000226766 3252 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Sssca1P56873 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.54□□□□□ -0.72
Sssca1P56873 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.54□□□□□ -0.72
Sssca1P56873 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sssca1P56873 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.53□□□□□ -0.72
Sssca1P56873 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sssca1P56873 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.53□□□□□ -0.72
Sssca1P56873 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms