Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.11□□□□□ -0.47
CckbrP56481 Gm5745-201ENSMUST00000183748 313 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Gm27839-201ENSMUST00000184242 106 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.11□□□□□ -0.47
CckbrP56481 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.1□□□□□ -0.47
CckbrP56481 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Gm11803-201ENSMUST00000119966 444 ntBASIC12.1□□□□□ -0.47
CckbrP56481 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
CckbrP56481 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.1□□□□□ -0.47
CckbrP56481 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.1□□□□□ -0.47
CckbrP56481 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.1□□□□□ -0.47
CckbrP56481 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.1□□□□□ -0.47
CckbrP56481 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CckbrP56481 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CckbrP56481 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CckbrP56481 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
CckbrP56481 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CckbrP56481 Gm8652-201ENSMUST00000181363 964 ntBASIC12.09□□□□□ -0.47
CckbrP56481 Gm27847-201ENSMUST00000183711 107 ntBASIC12.09□□□□□ -0.47
CckbrP56481 Gm27375-201ENSMUST00000183799 107 ntBASIC12.09□□□□□ -0.47
CckbrP56481 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.09□□□□□ -0.47
CckbrP56481 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CckbrP56481 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CckbrP56481 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms