Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm28760-201ENSMUST00000185995 736 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdkn2bP55271 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.49□□□□□ -0.41
Cdkn2bP55271 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.48□□□□□ -0.41
Cdkn2bP55271 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.48□□□□□ -0.41
Cdkn2bP55271 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.48□□□□□ -0.41
Cdkn2bP55271 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.48□□□□□ -0.41
Cdkn2bP55271 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.48□□□□□ -0.41
Cdkn2bP55271 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdkn2bP55271 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm13689-201ENSMUST00000119360 685 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm15321-201ENSMUST00000121290 288 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm14719-201ENSMUST00000121891 340 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm5354-201ENSMUST00000182417 973 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Mir7684-201ENSMUST00000183858 60 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms