Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.69□□□□□ -0.54
Abcd3P55096 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abcd3P55096 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Abcd3P55096 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Abcd3P55096 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abcd3P55096 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Abcd3P55096 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.68□□□□□ -0.54
Abcd3P55096 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Abcd3P55096 Gm12091-201ENSMUST00000146791 830 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Abcd3P55096 Gm28911-201ENSMUST00000188837 117 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.68□□□□□ -0.54
Abcd3P55096 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Gm8515-201ENSMUST00000194852 576 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Gm16372-201ENSMUST00000073088 450 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Abcd3P55096 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Abcd3P55096 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.68□□□□□ -0.54
Abcd3P55096 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Abcd3P55096 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Abcd3P55096 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Abcd3P55096 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.67□□□□□ -0.54
Abcd3P55096 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.67□□□□□ -0.54
Abcd3P55096 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.67□□□□□ -0.54
Abcd3P55096 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.67□□□□□ -0.54
Abcd3P55096 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.67□□□□□ -0.54
Abcd3P55096 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm6458-201ENSMUST00000211573 635 ntBASIC11.67□□□□□ -0.54
Abcd3P55096 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Abcd3P55096 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.67□□□□□ -0.54
Abcd3P55096 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Abcd3P55096 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Abcd3P55096 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms