Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox1P53783 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox1P53783 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Sox1P53783 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox1P53783 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox1P53783 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.27□□□□□ -0.29
Sox1P53783 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.27□□□□□ -0.29
Sox1P53783 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.27□□□□□ -0.29
Sox1P53783 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.27□□□□□ -0.29
Sox1P53783 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox1P53783 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox1P53783 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox1P53783 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Gm7541-201ENSMUST00000118361 535 ntBASIC13.26□□□□□ -0.29
Sox1P53783 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox1P53783 Gm15881-201ENSMUST00000148792 942 ntBASIC13.26□□□□□ -0.29
Sox1P53783 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Gm22121-201ENSMUST00000175148 54 ntBASIC13.26□□□□□ -0.29
Sox1P53783 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.26□□□□□ -0.29
Sox1P53783 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Sox1P53783 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sox1P53783 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.26□□□□□ -0.29
Sox1P53783 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox1P53783 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox1P53783 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox1P53783 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox1P53783 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms