Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Lbx1P52955 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm13035-201ENSMUST00000117496 342 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Gm14034-201ENSMUST00000120147 551 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm42518-201ENSMUST00000196277 938 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm35713-201ENSMUST00000210516 199 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lbx1P52955 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lbx1P52955 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.61□□□□□ -0.39
Lbx1P52955 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lbx1P52955 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Lbx1P52955 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lbx1P52955 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.6□□□□□ -0.39
Lbx1P52955 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lbx1P52955 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.6□□□□□ -0.39
Lbx1P52955 Gm13182-201ENSMUST00000122241 312 ntBASIC12.6□□□□□ -0.39
Lbx1P52955 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Gm22138-201ENSMUST00000158748 128 ntBASIC12.6□□□□□ -0.39
Lbx1P52955 Gm27627-201ENSMUST00000183644 150 ntBASIC12.6□□□□□ -0.39
Lbx1P52955 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.6□□□□□ -0.39
Lbx1P52955 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.6□□□□□ -0.39
Lbx1P52955 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lbx1P52955 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Lbx1P52955 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.6□□□□□ -0.39
Lbx1P52955 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lbx1P52955 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms