Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ClgnP52194 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ClgnP52194 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ClgnP52194 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.34□□□□□ -0.27
ClgnP52194 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Gm42550-201ENSMUST00000201553 960 ntBASIC13.34□□□□□ -0.27
ClgnP52194 Gm45668-201ENSMUST00000211271 493 ntBASIC13.34□□□□□ -0.27
ClgnP52194 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.34□□□□□ -0.27
ClgnP52194 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ClgnP52194 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.34□□□□□ -0.27
ClgnP52194 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ClgnP52194 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.34□□□□□ -0.27
ClgnP52194 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ClgnP52194 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
ClgnP52194 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.33□□□□□ -0.27
ClgnP52194 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ClgnP52194 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ClgnP52194 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ClgnP52194 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
ClgnP52194 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Gm15678-201ENSMUST00000117573 960 ntBASIC13.33□□□□□ -0.28
ClgnP52194 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.33□□□□□ -0.28
ClgnP52194 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.33□□□□□ -0.28
ClgnP52194 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.33□□□□□ -0.28
ClgnP52194 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ClgnP52194 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.33□□□□□ -0.28
ClgnP52194 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
ClgnP52194 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClgnP52194 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ClgnP52194 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClgnP52194 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.32□□□□□ -0.28
ClgnP52194 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.32□□□□□ -0.28
ClgnP52194 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms