Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shmt1P50431 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shmt1P50431 Snord83b-201ENSMUST00000104546 94 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.79□□□□□ -0.2
Shmt1P50431 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.79□□□□□ -0.2
Shmt1P50431 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.79□□□□□ -0.2
Shmt1P50431 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Gm17208-201ENSMUST00000168388 535 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt1P50431 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.79□□□□□ -0.2
Shmt1P50431 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt1P50431 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.79□□□□□ -0.2
Shmt1P50431 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shmt1P50431 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shmt1P50431 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shmt1P50431 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shmt1P50431 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Shmt1P50431 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Gm32025-201ENSMUST00000217960 307 ntBASIC13.78□□□□□ -0.2
Shmt1P50431 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shmt1P50431 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt1P50431 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shmt1P50431 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Shmt1P50431 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Shmt1P50431 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shmt1P50431 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Shmt1P50431 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Shmt1P50431 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm11591-201ENSMUST00000120063 702 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Shmt1P50431 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm4768-201ENSMUST00000206199 686 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Shmt1P50431 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms