Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
GdnfP48540 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.46□□□□□ -0.57
GdnfP48540 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.46□□□□□ -0.57
GdnfP48540 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Gm15678-201ENSMUST00000117573 960 ntBASIC11.46□□□□□ -0.57
GdnfP48540 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
GdnfP48540 Gm13385-201ENSMUST00000121089 220 ntBASIC11.46□□□□□ -0.57
GdnfP48540 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.46□□□□□ -0.57
GdnfP48540 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.46□□□□□ -0.57
GdnfP48540 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.46□□□□□ -0.57
GdnfP48540 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Gm27838-201ENSMUST00000184829 128 ntBASIC11.46□□□□□ -0.57
GdnfP48540 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.46□□□□□ -0.57
GdnfP48540 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
GdnfP48540 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.46□□□□□ -0.58
GdnfP48540 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
GdnfP48540 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.46□□□□□ -0.58
GdnfP48540 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
GdnfP48540 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.45□□□□□ -0.58
GdnfP48540 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.45□□□□□ -0.58
GdnfP48540 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Gm4804-201ENSMUST00000182234 999 ntBASIC11.45□□□□□ -0.58
GdnfP48540 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
GdnfP48540 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
GdnfP48540 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.45□□□□□ -0.58
GdnfP48540 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
GdnfP48540 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.44□□□□□ -0.58
GdnfP48540 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.44□□□□□ -0.58
GdnfP48540 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.44□□□□□ -0.58
GdnfP48540 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.44□□□□□ -0.58
GdnfP48540 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms