Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm22323-201ENSMUST00000103832 109 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm15236-201ENSMUST00000117309 379 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm7809-201ENSMUST00000153199 742 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Mospd4-201ENSMUST00000180618 576 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm37042-201ENSMUST00000193816 581 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm37259-201ENSMUST00000193903 849 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm18584-201ENSMUST00000203098 964 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm45865-201ENSMUST00000211815 945 ntBASIC12.34□□□□□ -0.43
Nkx2-6P43688 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-6P43688 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-6P43688 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.33□□□□□ -0.43
Nkx2-6P43688 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-6P43688 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm6023-201ENSMUST00000118217 606 ntBASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm26185-201ENSMUST00000157692 266 ntBASIC12.33□□□□□ -0.44
Nkx2-6P43688 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm3890-201ENSMUST00000182416 207 ntBASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm4857-201ENSMUST00000192718 785 ntBASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.33□□□□□ -0.44
Nkx2-6P43688 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-6P43688 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-6P43688 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-6P43688 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-6P43688 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-6P43688 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-6P43688 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms