Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.6□□□□□ -0.39
Tnfsf4P43488 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Gm15321-201ENSMUST00000121290 288 ntBASIC12.6□□□□□ -0.39
Tnfsf4P43488 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.6□□□□□ -0.39
Tnfsf4P43488 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfsf4P43488 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm22189-201ENSMUST00000103822 86 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm5354-201ENSMUST00000182417 973 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm38223-201ENSMUST00000194484 695 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.59□□□□□ -0.39
Tnfsf4P43488 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf4P43488 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.58□□□□□ -0.39
Tnfsf4P43488 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf4P43488 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Tnfsf4P43488 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf4P43488 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Tnfsf4P43488 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms