Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdx2P43241 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm8712-201ENSMUST00000221090 701 ntBASIC12.36□□□□□ -0.43
Cdx2P43241 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.36□□□□□ -0.43
Cdx2P43241 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdx2P43241 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdx2P43241 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdx2P43241 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cdx2P43241 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cdx2P43241 Gm14263-201ENSMUST00000117955 746 ntBASIC12.35□□□□□ -0.43
Cdx2P43241 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.35□□□□□ -0.43
Cdx2P43241 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdx2P43241 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdx2P43241 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Gm28450-201ENSMUST00000187349 638 ntBASIC12.35□□□□□ -0.43
Cdx2P43241 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdx2P43241 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.35□□□□□ -0.43
Cdx2P43241 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.35□□□□□ -0.43
Cdx2P43241 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cdx2P43241 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdx2P43241 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdx2P43241 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cdx2P43241 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cdx2P43241 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.34□□□□□ -0.43
Cdx2P43241 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.34□□□□□ -0.43
Cdx2P43241 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gm44405-201ENSMUST00000198952 126 ntBASIC12.34□□□□□ -0.43
Cdx2P43241 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.34□□□□□ -0.43
Cdx2P43241 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gm8385-201ENSMUST00000058999 643 ntBASIC12.34□□□□□ -0.43
Cdx2P43241 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Cdx2P43241 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdx2P43241 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms