Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sox6P40645 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.27□□□□□ -0.45
Sox6P40645 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox6P40645 Gm7488-201ENSMUST00000117148 684 ntBASIC12.27□□□□□ -0.45
Sox6P40645 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sox6P40645 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.27□□□□□ -0.45
Sox6P40645 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.27□□□□□ -0.45
Sox6P40645 Gm19220-201ENSMUST00000222682 803 ntBASIC12.27□□□□□ -0.45
Sox6P40645 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox6P40645 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox6P40645 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.27□□□□□ -0.45
Sox6P40645 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox6P40645 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox6P40645 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox6P40645 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox6P40645 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox6P40645 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox6P40645 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Sox6P40645 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox6P40645 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Gm5279-201ENSMUST00000199575 745 ntBASIC12.26□□□□□ -0.45
Sox6P40645 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Gm2423-201ENSMUST00000074863 733 ntBASIC12.26□□□□□ -0.45
Sox6P40645 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox6P40645 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox6P40645 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox6P40645 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox6P40645 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox6P40645 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox6P40645 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.26□□□□□ -0.45
Sox6P40645 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.26□□□□□ -0.45
Sox6P40645 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox6P40645 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Sox6P40645 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox6P40645 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sox6P40645 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox6P40645 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Sox6P40645 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox6P40645 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.25□□□□□ -0.45
Sox6P40645 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox6P40645 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms