Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chd1P40201 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chd1P40201 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Gm7959-201ENSMUST00000221823 1078 ntBASIC19.11■□□□□ 0.65
Chd1P40201 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chd1P40201 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC19.11■□□□□ 0.65
Chd1P40201 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm7722-201ENSMUST00000120646 741 ntBASIC19.11■□□□□ 0.65
Chd1P40201 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC19.11■□□□□ 0.65
Chd1P40201 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Gm45594-201ENSMUST00000211717 241 ntBASIC19.11■□□□□ 0.65
Chd1P40201 AC153962.2-201ENSMUST00000219417 550 ntBASIC19.11■□□□□ 0.65
Chd1P40201 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC19.11■□□□□ 0.65
Chd1P40201 Lgi3-203ENSMUST00000226548 1001 ntBASIC19.11■□□□□ 0.65
Chd1P40201 AC138604.1-201ENSMUST00000226969 739 ntBASIC19.11■□□□□ 0.65
Chd1P40201 Gm4604-201ENSMUST00000025040 390 ntBASIC19.11■□□□□ 0.65
Chd1P40201 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Gm21451-201ENSMUST00000111062 2775 ntBASIC19.11■□□□□ 0.65
Chd1P40201 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chd1P40201 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chd1P40201 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC19.1■□□□□ 0.65
Chd1P40201 Gm22442-201ENSMUST00000157256 144 ntBASIC19.1■□□□□ 0.65
Chd1P40201 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chd1P40201 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC19.09■□□□□ 0.65
Chd1P40201 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Gm4654-201ENSMUST00000183305 982 ntBASIC19.09■□□□□ 0.65
Chd1P40201 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC19.09■□□□□ 0.65
Chd1P40201 AC122350.1-201ENSMUST00000228135 533 ntBASIC19.09■□□□□ 0.65
Chd1P40201 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chd1P40201 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd1P40201 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Chd1P40201 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Chd1P40201 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC19.08■□□□□ 0.65
Chd1P40201 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Gm19680-201ENSMUST00000095050 1513 ntBASIC19.08■□□□□ 0.65
Chd1P40201 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd1P40201 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Chd1P40201 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Gm24844-201ENSMUST00000158679 127 ntBASIC19.08■□□□□ 0.64
Chd1P40201 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd1P40201 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Chd1P40201 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd1P40201 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Chd1P40201 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms