Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.44□□□□□ -0.58
Upk2P38575 Gm11618-201ENSMUST00000117946 267 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Gm8213-201ENSMUST00000118191 441 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.44□□□□□ -0.58
Upk2P38575 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.44□□□□□ -0.58
Upk2P38575 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Upk2P38575 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Upk2P38575 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.44□□□□□ -0.58
Upk2P38575 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Upk2P38575 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.44□□□□□ -0.58
Upk2P38575 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Upk2P38575 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Upk2P38575 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Upk2P38575 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Upk2P38575 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.43□□□□□ -0.58
Upk2P38575 Gm10156-201ENSMUST00000122364 462 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Proscos-202ENSMUST00000178990 666 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Gm28693-202ENSMUST00000190758 331 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Gm8598-201ENSMUST00000221184 836 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Upk2P38575 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Upk2P38575 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.43□□□□□ -0.58
Upk2P38575 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Upk2P38575 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Upk2P38575 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.42□□□□□ -0.58
Upk2P38575 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.42□□□□□ -0.58
Upk2P38575 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms