Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp13P33435 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm19078-201ENSMUST00000206311 727 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.36□□□□□ -0.27
Mmp13P33435 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.36□□□□□ -0.27
Mmp13P33435 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.36□□□□□ -0.27
Mmp13P33435 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.36□□□□□ -0.27
Mmp13P33435 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp13P33435 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Mmp13P33435 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp13P33435 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Mmp13P33435 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm11478-201ENSMUST00000117851 599 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Gm45384-201ENSMUST00000210451 277 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.35□□□□□ -0.27
Mmp13P33435 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Mmp13P33435 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.35□□□□□ -0.27
Mmp13P33435 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Mmp13P33435 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp13P33435 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mmp13P33435 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms