Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.02□□□□□ -0.48
Nedd8P29595 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nedd8P29595 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nedd8P29595 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nedd8P29595 Gm15770-201ENSMUST00000117498 584 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Rpph1-201ENSMUST00000175096 319 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Gm27459-201ENSMUST00000184860 107 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.02□□□□□ -0.49
Nedd8P29595 Gm45453-201ENSMUST00000211758 853 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nedd8P29595 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.02□□□□□ -0.49
Nedd8P29595 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nedd8P29595 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.02□□□□□ -0.49
Nedd8P29595 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nedd8P29595 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.01□□□□□ -0.49
Nedd8P29595 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.01□□□□□ -0.49
Nedd8P29595 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.01□□□□□ -0.49
Nedd8P29595 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.01□□□□□ -0.49
Nedd8P29595 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nedd8P29595 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nedd8P29595 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Nedd8P29595 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nedd8P29595 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nedd8P29595 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12□□□□□ -0.49
Nedd8P29595 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nedd8P29595 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12□□□□□ -0.49
Nedd8P29595 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12□□□□□ -0.49
Nedd8P29595 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nedd8P29595 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms