Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vcam1P29533 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm11930-201ENSMUST00000117788 190 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm8018-201ENSMUST00000173536 789 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm45925-201ENSMUST00000218882 744 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.93□□□□□ -0.02
Vcam1P29533 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vcam1P29533 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.92□□□□□ -0.02
Vcam1P29533 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Gm26461-201ENSMUST00000175064 290 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.92□□□□□ -0.02
Vcam1P29533 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Gm44967-201ENSMUST00000207047 631 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Gm8712-201ENSMUST00000221090 701 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.92□□□□□ -0.02
Vcam1P29533 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Vcam1P29533 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.92□□□□□ -0.02
Vcam1P29533 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Vcam1P29533 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.92□□□□□ -0.02
Vcam1P29533 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vcam1P29533 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vcam1P29533 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Vcam1P29533 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Vcam1P29533 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.91□□□□□ -0.02
Vcam1P29533 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vcam1P29533 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.91□□□□□ -0.02
Vcam1P29533 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.91□□□□□ -0.02
Vcam1P29533 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcam1P29533 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.91□□□□□ -0.02
Vcam1P29533 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms