Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf1bP25119 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm11425-201ENSMUST00000119608 498 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm4271-201ENSMUST00000174444 973 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm29127-201ENSMUST00000188304 517 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm9396-201ENSMUST00000076703 567 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Tnfrsf1bP25119 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf1bP25119 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf1bP25119 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.08□□□□□ -0.47
Tnfrsf1bP25119 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gm14127-201ENSMUST00000117906 678 ntBASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf1bP25119 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms