Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmga1P17095 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm14921-201ENSMUST00000118643 908 ntBASIC13.28□□□□□ -0.28
Hmga1P17095 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmga1P17095 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hmga1P17095 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.28□□□□□ -0.28
Hmga1P17095 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Hmga1P17095 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.28□□□□□ -0.28
Hmga1P17095 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Hmga1P17095 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmga1P17095 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.27□□□□□ -0.29
Hmga1P17095 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Hmga1P17095 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm22058-201ENSMUST00000083393 310 ntBASIC13.27□□□□□ -0.29
Hmga1P17095 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.27□□□□□ -0.29
Hmga1P17095 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.27□□□□□ -0.29
Hmga1P17095 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.27□□□□□ -0.29
Hmga1P17095 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmga1P17095 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Hmga1P17095 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm13492-201ENSMUST00000119772 665 ntBASIC13.26□□□□□ -0.29
Hmga1P17095 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm16296-201ENSMUST00000159905 325 ntBASIC13.26□□□□□ -0.29
Hmga1P17095 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.26□□□□□ -0.29
Hmga1P17095 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.26□□□□□ -0.29
Hmga1P17095 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm5904-201ENSMUST00000210286 865 ntBASIC13.26□□□□□ -0.29
Hmga1P17095 Gm5950-201ENSMUST00000213337 772 ntBASIC13.26□□□□□ -0.29
Hmga1P17095 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.26□□□□□ -0.29
Hmga1P17095 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmga1P17095 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmga1P17095 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms