Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ccl3P10855 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccl3P10855 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ccl3P10855 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Ccl3P10855 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm14208-201ENSMUST00000119645 678 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl3P10855 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Mir6927-201ENSMUST00000184494 71 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm19931-201ENSMUST00000198920 368 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm44262-201ENSMUST00000204969 372 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm45925-201ENSMUST00000218882 744 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm8712-201ENSMUST00000221090 701 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.48□□□□□ -0.57
Ccl3P10855 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccl3P10855 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccl3P10855 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl3P10855 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl3P10855 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Gm12566-201ENSMUST00000121479 359 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ccl3P10855 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl3P10855 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl3P10855 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl3P10855 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Gm44405-201ENSMUST00000198952 126 ntBASIC11.47□□□□□ -0.57
Ccl3P10855 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl3P10855 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccl3P10855 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl3P10855 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms